Establishment of genetic linkage by allele-specific polymerase chain reaction: application to the lignin peroxidase gene family of Phanerochaete chrysosporium.
Identifieur interne : 000D53 ( Main/Exploration ); précédent : 000D52; suivant : 000D54Establishment of genetic linkage by allele-specific polymerase chain reaction: application to the lignin peroxidase gene family of Phanerochaete chrysosporium.
Auteurs : J. Gaskell [États-Unis] ; P. Stewart ; P J Kersten ; S F Covert ; J. Reiser ; D. CullenSource :
- Bio/technology (Nature Publishing Company) [ 0733-222X ] ; 1994.
Descripteurs français
- KwdFr :
- ADN fongique (composition chimique), ADN fongique (génétique), Allèles (MeSH), Basidiomycota (enzymologie), Basidiomycota (génétique), Cartographie chromosomique (MeSH), Clonage moléculaire (MeSH), Données de séquences moléculaires (MeSH), Gènes fongiques (MeSH), Liaison génétique (MeSH), Peroxidases (génétique), Réaction de polymérisation en chaîne (MeSH), Sondes oligonucléotidiques (MeSH), Séquence nucléotidique (MeSH), Terminologie comme sujet (MeSH).
- MESH :
- composition chimique : ADN fongique.
- enzymologie : Basidiomycota.
- génétique : ADN fongique, Basidiomycota, Peroxidases.
- Allèles, Cartographie chromosomique, Clonage moléculaire, Données de séquences moléculaires, Gènes fongiques, Liaison génétique, Réaction de polymérisation en chaîne, Sondes oligonucléotidiques, Séquence nucléotidique, Terminologie comme sujet.
English descriptors
- KwdEn :
- Alleles (MeSH), Base Sequence (MeSH), Basidiomycota (enzymology), Basidiomycota (genetics), Chromosome Mapping (MeSH), Cloning, Molecular (MeSH), DNA, Fungal (chemistry), DNA, Fungal (genetics), Genes, Fungal (MeSH), Genetic Linkage (MeSH), Molecular Sequence Data (MeSH), Oligonucleotide Probes (MeSH), Peroxidases (genetics), Polymerase Chain Reaction (MeSH), Terminology as Topic (MeSH).
- MESH :
- chemical , chemistry : DNA, Fungal.
- enzymology : Basidiomycota.
- genetics : Basidiomycota, DNA, Fungal, Peroxidases.
- Alleles, Base Sequence, Chromosome Mapping, Cloning, Molecular, Genes, Fungal, Genetic Linkage, Molecular Sequence Data, Oligonucleotide Probes, Polymerase Chain Reaction, Terminology as Topic.
Abstract
Determining linkage is problematic for genes lacking easily identifiable phenotypes and for organisms without well-defined genetic recombination systems. Phanerochaete chrysosporium with its lignin peroxidase (LiP) gene family typifies these difficulties. We describe an experimental approach whereby the segregation of specific alleles is directly monitored during sexual fruiting. The method establishes linkage relationships among genes for which there are no mutations, and it is applicable to a wide range of genes, gene families and organisms. Using this approach, five P. chrysosporium linkage groups were identified. Ten LiP genes were distributed among three of these groups. One co-segregating group contained eight closely linked LiP genes. Another LiP gene was linked to a cellobiohydrolase gene cluster. These genetic linkages were consistent with physical mapping by pulsed field gel electrophoresis. Based on the identification of allelic relationships, a uniform nomenclature for LiP genes is also described.
DOI: 10.1038/nbt1294-1372
PubMed: 7765568
Affiliations:
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Le document en format XML
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Stewart</name></author><author><name sortKey="Kersten, P J" sort="Kersten, P J" uniqKey="Kersten P" first="P J" last="Kersten">P J Kersten</name></author><author><name sortKey="Covert, S F" sort="Covert, S F" uniqKey="Covert S" first="S F" last="Covert">S F Covert</name></author><author><name sortKey="Reiser, J" sort="Reiser, J" uniqKey="Reiser J" first="J" last="Reiser">J. Reiser</name></author><author><name sortKey="Cullen, D" sort="Cullen, D" uniqKey="Cullen D" first="D" last="Cullen">D. 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Phanerochaete chrysosporium with its lignin peroxidase (LiP) gene family typifies these difficulties. We describe an experimental approach whereby the segregation of specific alleles is directly monitored during sexual fruiting. The method establishes linkage relationships among genes for which there are no mutations, and it is applicable to a wide range of genes, gene families and organisms. Using this approach, five P. chrysosporium linkage groups were identified. Ten LiP genes were distributed among three of these groups. One co-segregating group contained eight closely linked LiP genes. Another LiP gene was linked to a cellobiohydrolase gene cluster. These genetic linkages were consistent with physical mapping by pulsed field gel electrophoresis. 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Phanerochaete chrysosporium with its lignin peroxidase (LiP) gene family typifies these difficulties. We describe an experimental approach whereby the segregation of specific alleles is directly monitored during sexual fruiting. The method establishes linkage relationships among genes for which there are no mutations, and it is applicable to a wide range of genes, gene families and organisms. Using this approach, five P. chrysosporium linkage groups were identified. Ten LiP genes were distributed among three of these groups. One co-segregating group contained eight closely linked LiP genes. Another LiP gene was linked to a cellobiohydrolase gene cluster. These genetic linkages were consistent with physical mapping by pulsed field gel electrophoresis. 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Cullen</name><name sortKey="Kersten, P J" sort="Kersten, P J" uniqKey="Kersten P" first="P J" last="Kersten">P J Kersten</name><name sortKey="Reiser, J" sort="Reiser, J" uniqKey="Reiser J" first="J" last="Reiser">J. Reiser</name><name sortKey="Stewart, P" sort="Stewart, P" uniqKey="Stewart P" first="P" last="Stewart">P. Stewart</name></noCountry><country name="États-Unis"><region name="Wisconsin"><name sortKey="Gaskell, J" sort="Gaskell, J" uniqKey="Gaskell J" first="J" last="Gaskell">J. Gaskell</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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